miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|24065022|gb|BU873498.1|BU873498 GGATCCTCTTTGATTTAAAGCATTTCTTACTGTTTTTATTTTCTCTGTCCAAACAAAGATGGCCGATCAGCTGACCGATG
ACCAGATCTCCGAGTTCGAGGAAGCTTTCAGCCTCTTCGATAAGGACGGCGATGGCTGCATTACTACTAAGGAGCTTGGG
ACTGTGATGCGTTCATTGGGCCAAAACCCAACTGAGGCAGAACTCCAGGACATGATAAACGAGGTCGATGCTGATGGGAA
TGGTACCATCGACTTCCCCGAGTTCCTCAACCTCATGGCCCGCAAGATGAAGGATACTGATTCTGAGGAGGAGCTCAAGG
AAGCTTTCAGAGTTTTTGATAAGGATCAGAATGGCTTCATTTCTGCTGCTGAGCTGCGCCATGTCATGACAAATCTTGGG
GAGAAGCTGACAGATGAGGAGGTTGATGAGATGATCCGTGAGGCTGATGTGGATGGTGATGGTCAGATCAACTACGAAGA
GTTTGTCAAAGTTATGATGGCCAAGTGAGGTTTACTCACCCAAAACCCAAAAACCAAATGCATAAAAACAAAAAAGAGAG
ACAGGGCAAATAAGTTTGATGAGAATTCTATTTCCCAATTAGGACATCTTCATTTGGTGTTATTAGCTTCAGCTGGGTTG
TTTGTTCTGTTGTTTGCATTATTTTGTGGCACTTTTCATTAATATCTACTTGTTTGCTCTGTTTTTTGTCCAGTAGCTTG
GCTTGTTAGCATCTTCTCATTGATGTTTGGCATTTTTCCTTCTACCTTTGGTATTA




Most similar to sp|P62201|CALM_LILLO

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
          Length = 149

 Score =  296 bits (758), Expect = 1e-79
 Identities = 148/149 (99%), Positives = 149/149 (100%)
 Frame = +2

Query: 59  MADQLTDDQISEFEEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 238
           MADQLTDDQISEF+EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 239 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 418
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 419 EVDEMIREADVDGDGQINYEEFVKVMMAK 505
           EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149